Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm11880-201ENSMUST00000117612 399 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm13038-201ENSMUST00000119886 459 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm22882-201ENSMUST00000157749 124 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm22948-201ENSMUST00000158561 243 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm18709-201ENSMUST00000180564 489 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm6610-201ENSMUST00000186324 358 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm28952-201ENSMUST00000189285 681 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm3103-201ENSMUST00000198073 752 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm20223-201ENSMUST00000199932 805 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Klra13-ps-203ENSMUST00000204367 850 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm18484-201ENSMUST00000204389 991 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm5586-201ENSMUST00000206264 795 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim9Q8C7M3 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.05□□□□□ -1.12
Trim9Q8C7M3 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm24541-201ENSMUST00000103871 96 ntBASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm22024-201ENSMUST00000122733 287 ntBASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm7341-201ENSMUST00000192183 926 ntBASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm37322-201ENSMUST00000193409 337 ntBASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm20274-201ENSMUST00000206967 584 ntBASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm45497-201ENSMUST00000211701 740 ntBASIC8.04□□□□□ -1.12
Trim9Q8C7M3 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm37151-201ENSMUST00000194631 5007 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms