Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 AC154785.1-201ENSMUST00000223280 572 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm10845-202ENSMUST00000228217 3389 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 AC124581.3-201ENSMUST00000224270 1624 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc40Q8BI79 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm24462-201ENSMUST00000102430 106 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm26014-201ENSMUST00000104405 132 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm12599-201ENSMUST00000120534 792 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm15079-201ENSMUST00000121943 216 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm15501-202ENSMUST00000140687 625 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm26736-201ENSMUST00000180425 1236 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Mir6340-201ENSMUST00000183857 119 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Mir6922-201ENSMUST00000185099 66 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm18351-201ENSMUST00000188646 883 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Gm19172-201ENSMUST00000203170 1246 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 AL590616.1-201ENSMUST00000223339 574 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Ermard-209ENSMUST00000226561 1019 ntBASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc40Q8BI79 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm42678-201ENSMUST00000197163 2221 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm14749-201ENSMUST00000121269 333 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Mir1962-201ENSMUST00000157516 121 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm22408-201ENSMUST00000174925 65 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm4891-201ENSMUST00000182279 912 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm8304-201ENSMUST00000185744 584 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm28145-201ENSMUST00000189742 380 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm42424-201ENSMUST00000198319 376 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm16475-202ENSMUST00000209033 528 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm45454-201ENSMUST00000211484 455 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm40853-201ENSMUST00000221342 582 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm18619-201ENSMUST00000222722 1147 ntBASIC7.72□□□□□ -1.17
Ccdc40Q8BI79 Gm9255-201ENSMUST00000223225 581 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms