Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm12152-201ENSMUST00000122465 684 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm26480-201ENSMUST00000122619 297 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm21756-201ENSMUST00000178380 930 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm21405-201ENSMUST00000179024 930 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Rps12l1-201ENSMUST00000183090 399 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm27804-201ENSMUST00000185135 119 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm21191-201ENSMUST00000186484 930 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm29503-201ENSMUST00000191044 930 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm36991-201ENSMUST00000191800 648 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm42760-201ENSMUST00000199814 311 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm30708-201ENSMUST00000202183 312 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm44422-201ENSMUST00000204142 1025 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm9357-201ENSMUST00000207138 805 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 CT009550.2-201ENSMUST00000228851 399 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm44769-201ENSMUST00000206120 2809 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Lipa-202ENSMUST00000178114 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm28906-201ENSMUST00000191371 1779 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm26967-201ENSMUST00000182878 2303 ntBASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Gm38404-201ENSMUST00000202005 2496 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sf3b2Q3UJB0 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm44937-201ENSMUST00000207705 2691 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm38099-201ENSMUST00000193280 3170 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm37159-201ENSMUST00000192720 3605 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm11416-201ENSMUST00000119111 863 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm12879-201ENSMUST00000120003 1182 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm22847-201ENSMUST00000157707 105 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm23386-201ENSMUST00000158585 144 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Sec23a-204ENSMUST00000165134 2529 ntTSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm3760-201ENSMUST00000167475 804 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm26528-201ENSMUST00000181965 283 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm27507-201ENSMUST00000184199 93 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Mir7653-201ENSMUST00000184358 61 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm18797-201ENSMUST00000190809 1174 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 BC085271-201ENSMUST00000191852 1487 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm19175-201ENSMUST00000199895 916 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm18726-201ENSMUST00000218175 2010 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm10126-201ENSMUST00000221732 168 ntBASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Pcdhb8-201ENSMUST00000051163 3334 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms