Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim43aQ3TL54 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim43aQ3TL54 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim43aQ3TL54 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim43aQ3TL54 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim43aQ3TL54 Gm43181-201ENSMUST00000197001 2072 ntBASIC7.77□□□□□ -1.17
Trim43aQ3TL54 Gm45084-201ENSMUST00000207096 1957 ntBASIC7.77□□□□□ -1.17
Trim43aQ3TL54 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim43aQ3TL54 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim43aQ3TL54 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Trim43aQ3TL54 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Klf5-202ENSMUST00000226784 2852 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm13929-201ENSMUST00000117553 1125 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm13006-201ENSMUST00000118683 214 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm11945-201ENSMUST00000120551 476 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm24530-201ENSMUST00000157948 288 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm5611-201ENSMUST00000164523 852 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Mir199b-201ENSMUST00000175066 110 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm21182-201ENSMUST00000178899 794 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Mir7669-201ENSMUST00000183442 58 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm37295-201ENSMUST00000192186 109 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm38047-201ENSMUST00000193690 1133 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm35108-201ENSMUST00000194321 699 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm33191-201ENSMUST00000195604 699 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm44982-201ENSMUST00000208795 471 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 AC154785.1-201ENSMUST00000223280 572 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 CT009539.1-201ENSMUST00000226465 220 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Trim43aQ3TL54 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.76□□□□□ -1.17
Trim43aQ3TL54 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim43aQ3TL54 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.75□□□□□ -1.17
Trim43aQ3TL54 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms