Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm27597-201ENSMUST00000184365 80 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Mir6912-201ENSMUST00000184456 70 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm27506-201ENSMUST00000184558 80 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm27529-201ENSMUST00000184975 80 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm27907-201ENSMUST00000185101 80 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC8.44□□□□□ -1.06
Hmgb1P63158 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC8.44□□□□□ -1.06
Hmgb1P63158 AC163660.3-202ENSMUST00000224917 464 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm25259-201ENSMUST00000083048 193 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Hmgb1P63158 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Hmgb1P63158 Gm42658-201ENSMUST00000197199 1575 ntBASIC8.44□□□□□ -1.06
Hmgb1P63158 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.43□□□□□ -1.06
Hmgb1P63158 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Hmgb1P63158 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Hmgb1P63158 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm44550-201ENSMUST00000207311 2058 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm22934-201ENSMUST00000103961 132 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm8802-201ENSMUST00000118633 740 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm15047-201ENSMUST00000118891 454 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm15355-201ENSMUST00000118929 285 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm6654-201ENSMUST00000118950 348 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm13622-201ENSMUST00000120658 433 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm23187-201ENSMUST00000175746 86 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm37173-201ENSMUST00000194498 1017 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm43008-201ENSMUST00000202346 286 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm45405-201ENSMUST00000211544 609 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm32842-201ENSMUST00000212653 738 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 CT030124.1-201ENSMUST00000217130 235 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.43□□□□□ -1.06
Hmgb1P63158 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC8.43□□□□□ -1.06
Hmgb1P63158 AL645704.1-201ENSMUST00000221642 604 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Hmgb1P63158 AC139323.1-201ENSMUST00000223370 1040 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 AC107663.2-201ENSMUST00000225534 1234 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Hmgb1P63158 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Hmgb1P63158 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
Hmgb1P63158 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Hmgb1P63158 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.43□□□□□ -1.06
Hmgb1P63158 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Hmgb1P63158 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Hmgb1P63158 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms