Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm16056-201ENSMUST00000119293 135 ntBASIC7.89□□□□□ -1.15
NcanP55066 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.89□□□□□ -1.15
NcanP55066 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Gm25780-201ENSMUST00000122528 253 ntBASIC7.89□□□□□ -1.15
NcanP55066 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC7.89□□□□□ -1.15
NcanP55066 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC7.89□□□□□ -1.15
NcanP55066 Gm3760-201ENSMUST00000167475 804 ntBASIC7.89□□□□□ -1.15
NcanP55066 Gm25246-201ENSMUST00000175476 69 ntBASIC7.89□□□□□ -1.15
NcanP55066 Gm26505-201ENSMUST00000176208 166 ntBASIC7.89□□□□□ -1.15
NcanP55066 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Gm28787-201ENSMUST00000188357 696 ntBASIC7.89□□□□□ -1.15
NcanP55066 Gm29144-201ENSMUST00000189235 339 ntBASIC7.89□□□□□ -1.15
NcanP55066 Gm29559-201ENSMUST00000189412 696 ntBASIC7.89□□□□□ -1.15
NcanP55066 Gm28607-201ENSMUST00000190142 339 ntBASIC7.89□□□□□ -1.15
NcanP55066 Gm28165-201ENSMUST00000190669 694 ntBASIC7.89□□□□□ -1.15
NcanP55066 Gm28121-201ENSMUST00000191420 339 ntBASIC7.89□□□□□ -1.15
NcanP55066 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7.89□□□□□ -1.15
NcanP55066 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Gm43377-201ENSMUST00000201640 455 ntBASIC7.89□□□□□ -1.15
NcanP55066 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.89□□□□□ -1.15
NcanP55066 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.89□□□□□ -1.15
NcanP55066 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
NcanP55066 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
NcanP55066 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NcanP55066 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
NcanP55066 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
NcanP55066 Gm42692-201ENSMUST00000199482 2833 ntBASIC7.88□□□□□ -1.15
NcanP55066 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
NcanP55066 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
NcanP55066 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
NcanP55066 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
NcanP55066 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
NcanP55066 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
NcanP55066 Gm24519-201ENSMUST00000104507 132 ntBASIC7.88□□□□□ -1.15
NcanP55066 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.88□□□□□ -1.15
NcanP55066 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.88□□□□□ -1.15
NcanP55066 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Gm9428-201ENSMUST00000127214 769 ntBASIC7.88□□□□□ -1.15
NcanP55066 Gm22847-201ENSMUST00000157707 105 ntBASIC7.88□□□□□ -1.15
NcanP55066 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
NcanP55066 Gm4152-201ENSMUST00000172675 259 ntBASIC7.88□□□□□ -1.15
NcanP55066 Mir3097-201ENSMUST00000175356 67 ntBASIC7.88□□□□□ -1.15
NcanP55066 Mir378d-201ENSMUST00000184232 110 ntBASIC7.88□□□□□ -1.15
NcanP55066 Gm27998-201ENSMUST00000184902 361 ntBASIC7.88□□□□□ -1.15
NcanP55066 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.88□□□□□ -1.15
NcanP55066 Gm43501-201ENSMUST00000202513 107 ntBASIC7.88□□□□□ -1.15
NcanP55066 Gm44919-201ENSMUST00000208587 1073 ntBASIC7.88□□□□□ -1.15
NcanP55066 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.88□□□□□ -1.15
NcanP55066 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.88□□□□□ -1.15
NcanP55066 Gm18409-202ENSMUST00000220105 529 ntBASIC7.88□□□□□ -1.15
NcanP55066 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC7.88□□□□□ -1.15
NcanP55066 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.88□□□□□ -1.15
NcanP55066 Gm10126-201ENSMUST00000221732 168 ntBASIC7.88□□□□□ -1.15
NcanP55066 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.88□□□□□ -1.15
NcanP55066 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
NcanP55066 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
NcanP55066 Olfr1350-203ENSMUST00000219278 1768 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
NcanP55066 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
NcanP55066 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
NcanP55066 Gm37120-201ENSMUST00000193350 5959 ntBASIC7.88□□□□□ -1.15
NcanP55066 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
NcanP55066 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
NcanP55066 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms