Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.52□□□□□ -1.37
P20040 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Gm38147-201ENSMUST00000192397 1798 ntBASIC6.52□□□□□ -1.37
P20040 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.51□□□□□ -1.37
P20040 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.51□□□□□ -1.37
P20040 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
P20040 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
P20040 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
P20040 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC6.51□□□□□ -1.37
P20040 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
P20040 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
P20040 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.51□□□□□ -1.37
P20040 Cmah-208ENSMUST00000224819 9482 ntBASIC6.51□□□□□ -1.37
P20040 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
P20040 Gm23484-201ENSMUST00000104178 131 ntBASIC6.51□□□□□ -1.37
P20040 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Gm14584-201ENSMUST00000118956 637 ntBASIC6.51□□□□□ -1.37
P20040 Gm15665-201ENSMUST00000119116 847 ntBASIC6.51□□□□□ -1.37
P20040 Gm14826-201ENSMUST00000121284 901 ntBASIC6.51□□□□□ -1.37
P20040 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
P20040 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Gm25277-201ENSMUST00000157266 324 ntBASIC6.51□□□□□ -1.37
P20040 Gm24130-201ENSMUST00000158536 151 ntBASIC6.51□□□□□ -1.37
P20040 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC6.51□□□□□ -1.37
P20040 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC6.51□□□□□ -1.37
P20040 Gm20797-201ENSMUST00000177894 383 ntBASIC6.51□□□□□ -1.37
P20040 Mir6340-201ENSMUST00000183857 119 ntBASIC6.51□□□□□ -1.37
P20040 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC6.51□□□□□ -1.37
P20040 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.51□□□□□ -1.37
P20040 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
P20040 Gm42932-201ENSMUST00000197280 744 ntBASIC6.51□□□□□ -1.37
P20040 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.51□□□□□ -1.37
P20040 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.51□□□□□ -1.37
P20040 Gm7151-201ENSMUST00000211511 954 ntBASIC6.51□□□□□ -1.37
P20040 Gm7392-201ENSMUST00000217815 345 ntBASIC6.51□□□□□ -1.37
P20040 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.51□□□□□ -1.37
P20040 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
P20040 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
P20040 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Gm6767-201ENSMUST00000118650 1381 ntBASIC6.51□□□□□ -1.37
P20040 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
P20040 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
P20040 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.51□□□□□ -1.37
P20040 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
P20040 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.51□□□□□ -1.37
P20040 Gm45634-201ENSMUST00000209736 1990 ntBASIC6.51□□□□□ -1.37
P20040 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.51□□□□□ -1.37
P20040 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
P20040 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.51□□□□□ -1.37
P20040 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.51□□□□□ -1.37
P20040 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
P20040 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
P20040 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.5□□□□□ -1.37
P20040 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
P20040 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
P20040 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.5□□□□□ -1.37
P20040 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
P20040 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.5□□□□□ -1.37
P20040 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.5□□□□□ -1.37
P20040 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
P20040 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC6.5□□□□□ -1.37
P20040 Gm6490-201ENSMUST00000111862 461 ntBASIC6.5□□□□□ -1.37
P20040 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
P20040 Gm16418-201ENSMUST00000118577 171 ntBASIC6.5□□□□□ -1.37
P20040 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC6.5□□□□□ -1.37
P20040 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.5□□□□□ -1.37
P20040 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
P20040 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 271.6 ms