Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm5255-201ENSMUST00000120125 642 ntBASIC8.58□□□□□ -1.04
Col1a1P11087 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Col1a1P11087 Gm10410-201ENSMUST00000180138 384 ntBASIC8.58□□□□□ -1.04
Col1a1P11087 Gm26898-201ENSMUST00000181678 384 ntBASIC8.58□□□□□ -1.04
Col1a1P11087 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Gm18699-201ENSMUST00000190713 243 ntBASIC8.58□□□□□ -1.04
Col1a1P11087 Gm42752-201ENSMUST00000198394 1106 ntBASIC8.58□□□□□ -1.04
Col1a1P11087 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC8.58□□□□□ -1.04
Col1a1P11087 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC8.58□□□□□ -1.04
Col1a1P11087 Gm2221-201ENSMUST00000209342 418 ntBASIC8.58□□□□□ -1.04
Col1a1P11087 Mir106b-201ENSMUST00000083580 82 ntBASIC8.58□□□□□ -1.04
Col1a1P11087 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Gm15681-201ENSMUST00000137501 2704 ntBASIC8.58□□□□□ -1.04
Col1a1P11087 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC8.58□□□□□ -1.04
Col1a1P11087 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Col1a1P11087 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Col1a1P11087 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 AC154522.1-201ENSMUST00000224647 1903 ntBASIC8.58□□□□□ -1.04
Col1a1P11087 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Gm7134-201ENSMUST00000122296 2406 ntBASIC8.58□□□□□ -1.04
Col1a1P11087 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC8.58□□□□□ -1.04
Col1a1P11087 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Gm22284-201ENSMUST00000104132 132 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Gm22953-201ENSMUST00000116724 101 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC8.57□□□□□ -1.04
Col1a1P11087 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm22428-201ENSMUST00000158554 132 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm7285-201ENSMUST00000198801 580 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Gm2926-201ENSMUST00000205625 239 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC8.57□□□□□ -1.04
Col1a1P11087 AC164295.1-201ENSMUST00000224861 186 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm24451-201ENSMUST00000083353 133 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Col1a1P11087 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col1a1P11087 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC8.57□□□□□ -1.04
Col1a1P11087 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col1a1P11087 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC8.57□□□□□ -1.04
Col1a1P11087 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col1a1P11087 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col1a1P11087 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.57□□□□□ -1.04
Col1a1P11087 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm15209-201ENSMUST00000117703 400 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Gm11501-201ENSMUST00000118039 581 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Gm24383-201ENSMUST00000122691 333 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.57□□□□□ -1.04
Col1a1P11087 Gm9672-201ENSMUST00000166437 425 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Gm43905-201ENSMUST00000204516 204 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 AC166574.3-201ENSMUST00000226725 367 ntBASIC8.57□□□□□ -1.04
Col1a1P11087 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Col1a1P11087 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC8.57□□□□□ -1.04
Col1a1P11087 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC8.57□□□□□ -1.04
Col1a1P11087 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col1a1P11087 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Col1a1P11087 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col1a1P11087 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col1a1P11087 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Col1a1P11087 Gm9874-202ENSMUST00000194957 1464 ntBASIC8.56□□□□□ -1.04
Col1a1P11087 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms