Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Mrpl40Q9Z2Q5 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.4■□□□□ 0.54
Mrpl40Q9Z2Q5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Mrpl40Q9Z2Q5 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.4■□□□□ 0.54
Mrpl40Q9Z2Q5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mrpl40Q9Z2Q5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mrpl40Q9Z2Q5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Mrpl40Q9Z2Q5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Mrpl40Q9Z2Q5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mrpl40Q9Z2Q5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mrpl40Q9Z2Q5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mrpl40Q9Z2Q5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mrpl40Q9Z2Q5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Mrpl40Q9Z2Q5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Mrpl40Q9Z2Q5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm4968-201ENSMUST00000071458 858 ntBASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl40Q9Z2Q5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm10653-202ENSMUST00000139570 835 ntBASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl40Q9Z2Q5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Rarb-207ENSMUST00000225921 2756 ntBASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm7290-201ENSMUST00000104990 617 ntBASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm13148-201ENSMUST00000118892 745 ntBASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm12918-201ENSMUST00000120234 636 ntBASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm13534-201ENSMUST00000121169 513 ntBASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm15710-201ENSMUST00000121821 636 ntBASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm5075-201ENSMUST00000196916 622 ntBASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl40Q9Z2Q5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm7860-201ENSMUST00000121190 879 ntBASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl40Q9Z2Q5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms