Protein–RNA interactions for Protein: Q9WUT7

Ccr9, C-C chemokine receptor type 9, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9Q9WUT7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccr9Q9WUT7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccr9Q9WUT7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccr9Q9WUT7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.03■□□□□ 0.16
Ccr9Q9WUT7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccr9Q9WUT7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccr9Q9WUT7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccr9Q9WUT7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccr9Q9WUT7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccr9Q9WUT7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccr9Q9WUT7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccr9Q9WUT7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Ccr9Q9WUT7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccr9Q9WUT7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ccr9Q9WUT7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccr9Q9WUT7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccr9Q9WUT7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.02■□□□□ 0.16
Ccr9Q9WUT7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccr9Q9WUT7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.02■□□□□ 0.16
Ccr9Q9WUT7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.02■□□□□ 0.15
Ccr9Q9WUT7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.02■□□□□ 0.15
Ccr9Q9WUT7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccr9Q9WUT7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Ccr9Q9WUT7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.02■□□□□ 0.15
Ccr9Q9WUT7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccr9Q9WUT7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 CT010467.1-202ENSMUST00000205406 714 ntBASIC16■□□□□ 0.15
Ccr9Q9WUT7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ccr9Q9WUT7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccr9Q9WUT7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16■□□□□ 0.15
Ccr9Q9WUT7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Gm13146-201ENSMUST00000118508 780 ntBASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccr9Q9WUT7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Ccr9Q9WUT7 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.98■□□□□ 0.15
Ccr9Q9WUT7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccr9Q9WUT7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
Ccr9Q9WUT7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccr9Q9WUT7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccr9Q9WUT7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.98■□□□□ 0.15
Ccr9Q9WUT7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Ccr9Q9WUT7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccr9Q9WUT7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccr9Q9WUT7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccr9Q9WUT7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccr9Q9WUT7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms