Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a4Q9QZR9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.75■□□□□ 0.59
Col4a4Q9QZR9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a4Q9QZR9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a4Q9QZR9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a4Q9QZR9 Gm7153-201ENSMUST00000117092 455 ntBASIC18.75■□□□□ 0.59
Col4a4Q9QZR9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Col4a4Q9QZR9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a4Q9QZR9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.75■□□□□ 0.59
Col4a4Q9QZR9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Col4a4Q9QZR9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Col4a4Q9QZR9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a4Q9QZR9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a4Q9QZR9 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.74■□□□□ 0.59
Col4a4Q9QZR9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a4Q9QZR9 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.74■□□□□ 0.59
Col4a4Q9QZR9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a4Q9QZR9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a4Q9QZR9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a4Q9QZR9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a4Q9QZR9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Gm17661-201ENSMUST00000170317 270 ntBASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Mir2861-201ENSMUST00000175539 82 ntBASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.73■□□□□ 0.59
Col4a4Q9QZR9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 Gm22697-201ENSMUST00000175194 63 ntBASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 Gm17807-201ENSMUST00000186869 298 ntBASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 Gm44771-201ENSMUST00000206975 626 ntBASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.72■□□□□ 0.59
Col4a4Q9QZR9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a4Q9QZR9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.71■□□□□ 0.59
Col4a4Q9QZR9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.71■□□□□ 0.59
Col4a4Q9QZR9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a4Q9QZR9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.71■□□□□ 0.59
Col4a4Q9QZR9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Col4a4Q9QZR9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.71■□□□□ 0.59
Col4a4Q9QZR9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Col4a4Q9QZR9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Col4a4Q9QZR9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a4Q9QZR9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a4Q9QZR9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a4Q9QZR9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms