Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Phtf1Q9QZ09 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Phtf1Q9QZ09 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Phtf1Q9QZ09 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.33■□□□□ 0.84
Phtf1Q9QZ09 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Phtf1Q9QZ09 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Phtf1Q9QZ09 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Phtf1Q9QZ09 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.32■□□□□ 0.84
Phtf1Q9QZ09 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Phtf1Q9QZ09 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.32■□□□□ 0.84
Phtf1Q9QZ09 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Phtf1Q9QZ09 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.32■□□□□ 0.84
Phtf1Q9QZ09 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.32■□□□□ 0.84
Phtf1Q9QZ09 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Phtf1Q9QZ09 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.32■□□□□ 0.84
Phtf1Q9QZ09 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Phtf1Q9QZ09 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Phtf1Q9QZ09 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Phtf1Q9QZ09 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Phtf1Q9QZ09 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Phtf1Q9QZ09 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Phtf1Q9QZ09 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.31■□□□□ 0.84
Phtf1Q9QZ09 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Phtf1Q9QZ09 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Phtf1Q9QZ09 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Rab3c-203ENSMUST00000224180 967 ntBASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Phtf1Q9QZ09 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phtf1Q9QZ09 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Gm5408-201ENSMUST00000197998 747 ntBASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Phtf1Q9QZ09 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Phtf1Q9QZ09 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.27■□□□□ 0.84
Phtf1Q9QZ09 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.27■□□□□ 0.84
Phtf1Q9QZ09 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Phtf1Q9QZ09 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Phtf1Q9QZ09 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Phtf1Q9QZ09 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
Phtf1Q9QZ09 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Phtf1Q9QZ09 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.27■□□□□ 0.84
Phtf1Q9QZ09 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Phtf1Q9QZ09 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Phtf1Q9QZ09 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Phtf1Q9QZ09 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Gm12441-201ENSMUST00000121806 588 ntBASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Phtf1Q9QZ09 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Phtf1Q9QZ09 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Phtf1Q9QZ09 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 158.2 ms