Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Chaf1aQ9QWF0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chaf1aQ9QWF0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1aQ9QWF0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1aQ9QWF0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Chaf1aQ9QWF0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1aQ9QWF0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.63■□□□□ 0.89
Chaf1aQ9QWF0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1aQ9QWF0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1aQ9QWF0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1aQ9QWF0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1aQ9QWF0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Gm26833-201ENSMUST00000180899 440 ntBASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Grk6-206ENSMUST00000224995 2971 ntBASIC20.61■□□□□ 0.89
Chaf1aQ9QWF0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chaf1aQ9QWF0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Chaf1aQ9QWF0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chaf1aQ9QWF0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chaf1aQ9QWF0 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.6■□□□□ 0.89
Chaf1aQ9QWF0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chaf1aQ9QWF0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.6■□□□□ 0.89
Chaf1aQ9QWF0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Chaf1aQ9QWF0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.6■□□□□ 0.89
Chaf1aQ9QWF0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.59■□□□□ 0.89
Chaf1aQ9QWF0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Chaf1aQ9QWF0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chaf1aQ9QWF0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Chaf1aQ9QWF0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chaf1aQ9QWF0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chaf1aQ9QWF0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chaf1aQ9QWF0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chaf1aQ9QWF0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Chaf1aQ9QWF0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chaf1aQ9QWF0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chaf1aQ9QWF0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chaf1aQ9QWF0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chaf1aQ9QWF0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chaf1aQ9QWF0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Chaf1aQ9QWF0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chaf1aQ9QWF0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.58■□□□□ 0.89
Chaf1aQ9QWF0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.58■□□□□ 0.89
Chaf1aQ9QWF0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chaf1aQ9QWF0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chaf1aQ9QWF0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chaf1aQ9QWF0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.58■□□□□ 0.88
Chaf1aQ9QWF0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1aQ9QWF0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1aQ9QWF0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1aQ9QWF0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1aQ9QWF0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1aQ9QWF0 Gm38205-201ENSMUST00000192243 258 ntBASIC20.57■□□□□ 0.88
Chaf1aQ9QWF0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1aQ9QWF0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1aQ9QWF0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1aQ9QWF0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1aQ9QWF0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms