Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Msh5Q9QUM7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Msh5Q9QUM7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Msh5Q9QUM7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Msh5Q9QUM7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.76■□□□□ 0.59
Msh5Q9QUM7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh5Q9QUM7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh5Q9QUM7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Msh5Q9QUM7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh5Q9QUM7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh5Q9QUM7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh5Q9QUM7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Msh5Q9QUM7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Msh5Q9QUM7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Msh5Q9QUM7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.73■□□□□ 0.59
Msh5Q9QUM7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh5Q9QUM7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.72■□□□□ 0.59
Msh5Q9QUM7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh5Q9QUM7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh5Q9QUM7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Msh5Q9QUM7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
Msh5Q9QUM7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh5Q9QUM7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh5Q9QUM7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh5Q9QUM7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh5Q9QUM7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms