Protein–RNA interactions for Protein: Q9JM96

Cdc42ep4, Cdc42 effector protein 4, mousemouse

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep4Q9JM96 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdc42ep4Q9JM96 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdc42ep4Q9JM96 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdc42ep4Q9JM96 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdc42ep4Q9JM96 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdc42ep4Q9JM96 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdc42ep4Q9JM96 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdc42ep4Q9JM96 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdc42ep4Q9JM96 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdc42ep4Q9JM96 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdc42ep4Q9JM96 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdc42ep4Q9JM96 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cdc42ep4Q9JM96 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc42ep4Q9JM96 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc42ep4Q9JM96 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdc42ep4Q9JM96 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cdc42ep4Q9JM96 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdc42ep4Q9JM96 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cdc42ep4Q9JM96 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdc42ep4Q9JM96 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdc42ep4Q9JM96 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdc42ep4Q9JM96 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.22■□□□□ 0.83
Cdc42ep4Q9JM96 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdc42ep4Q9JM96 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.22■□□□□ 0.83
Cdc42ep4Q9JM96 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdc42ep4Q9JM96 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.83
Cdc42ep4Q9JM96 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdc42ep4Q9JM96 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdc42ep4Q9JM96 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdc42ep4Q9JM96 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdc42ep4Q9JM96 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms