Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scn5aQ9JJV9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn5aQ9JJV9 Gm37292-201ENSMUST00000192062 758 ntBASIC19.19■□□□□ 0.66
Scn5aQ9JJV9 Gm30025-201ENSMUST00000218555 728 ntBASIC19.19■□□□□ 0.66
Scn5aQ9JJV9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Scn5aQ9JJV9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn5aQ9JJV9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn5aQ9JJV9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn5aQ9JJV9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scn5aQ9JJV9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn5aQ9JJV9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn5aQ9JJV9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn5aQ9JJV9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn5aQ9JJV9 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.18■□□□□ 0.66
Scn5aQ9JJV9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn5aQ9JJV9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Scn5aQ9JJV9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn5aQ9JJV9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn5aQ9JJV9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Scn5aQ9JJV9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.18■□□□□ 0.66
Scn5aQ9JJV9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn5aQ9JJV9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn5aQ9JJV9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn5aQ9JJV9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn5aQ9JJV9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Gm11539-201ENSMUST00000119837 557 ntBASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Gm13436-201ENSMUST00000120418 567 ntBASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Timm23-208ENSMUST00000226683 750 ntBASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Scn5aQ9JJV9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 Gm10138-203ENSMUST00000206952 366 ntBASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 Gm10819-201ENSMUST00000099988 561 ntBASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn5aQ9JJV9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn5aQ9JJV9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn5aQ9JJV9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Scn5aQ9JJV9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Scn5aQ9JJV9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn5aQ9JJV9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
Scn5aQ9JJV9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn5aQ9JJV9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn5aQ9JJV9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn5aQ9JJV9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Scn5aQ9JJV9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn5aQ9JJV9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.14■□□□□ 0.65
Scn5aQ9JJV9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn5aQ9JJV9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Gm13559-201ENSMUST00000120476 863 ntBASIC19.13■□□□□ 0.65
Scn5aQ9JJV9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms