Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trim39Q9ESN2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim39Q9ESN2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim39Q9ESN2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim39Q9ESN2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim39Q9ESN2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim39Q9ESN2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim39Q9ESN2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim39Q9ESN2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim39Q9ESN2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim39Q9ESN2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim39Q9ESN2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim39Q9ESN2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.17■□□□□ 0.34
Trim39Q9ESN2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Trim39Q9ESN2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim39Q9ESN2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim39Q9ESN2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim39Q9ESN2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim39Q9ESN2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim39Q9ESN2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim39Q9ESN2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim39Q9ESN2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim39Q9ESN2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Trim39Q9ESN2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Trim39Q9ESN2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Trim39Q9ESN2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim39Q9ESN2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim39Q9ESN2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim39Q9ESN2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim39Q9ESN2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim39Q9ESN2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.15■□□□□ 0.34
Trim39Q9ESN2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim39Q9ESN2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim39Q9ESN2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim39Q9ESN2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim39Q9ESN2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim39Q9ESN2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim39Q9ESN2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim39Q9ESN2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim39Q9ESN2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Trim39Q9ESN2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim39Q9ESN2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms