Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Trim54Q9ERP3 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.97■□□□□ 0.79
Trim54Q9ERP3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim54Q9ERP3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim54Q9ERP3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim54Q9ERP3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim54Q9ERP3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim54Q9ERP3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim54Q9ERP3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim54Q9ERP3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim54Q9ERP3 Gm10698-201ENSMUST00000182663 604 ntBASIC19.96■□□□□ 0.79
Trim54Q9ERP3 Gm18666-201ENSMUST00000190039 958 ntBASIC19.96■□□□□ 0.79
Trim54Q9ERP3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.96■□□□□ 0.79
Trim54Q9ERP3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim54Q9ERP3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim54Q9ERP3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim54Q9ERP3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim54Q9ERP3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trim54Q9ERP3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.95■□□□□ 0.78
Trim54Q9ERP3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim54Q9ERP3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trim54Q9ERP3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.95■□□□□ 0.78
Trim54Q9ERP3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim54Q9ERP3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim54Q9ERP3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.95■□□□□ 0.78
Trim54Q9ERP3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim54Q9ERP3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim54Q9ERP3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Gm6576-201ENSMUST00000169678 883 ntBASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Golph3-202ENSMUST00000226517 2359 ntBASIC19.93■□□□□ 0.78
Trim54Q9ERP3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim54Q9ERP3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim54Q9ERP3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 Gm13158-201ENSMUST00000122007 736 ntBASIC19.9■□□□□ 0.78
Trim54Q9ERP3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.9■□□□□ 0.78
Trim54Q9ERP3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim54Q9ERP3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms