Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lime1Q9EQR5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lime1Q9EQR5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lime1Q9EQR5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lime1Q9EQR5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Gm26833-201ENSMUST00000180899 440 ntBASIC16.09■□□□□ 0.17
Lime1Q9EQR5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Gm40848-201ENSMUST00000221998 324 ntBASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Lime1Q9EQR5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lime1Q9EQR5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lime1Q9EQR5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lime1Q9EQR5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.08■□□□□ 0.17
Lime1Q9EQR5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lime1Q9EQR5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Gm12821-201ENSMUST00000120022 600 ntBASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Gm27454-201ENSMUST00000185090 204 ntBASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lime1Q9EQR5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lime1Q9EQR5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lime1Q9EQR5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lime1Q9EQR5 Tgds-204ENSMUST00000228543 1594 ntBASIC16.06■□□□□ 0.16
Lime1Q9EQR5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lime1Q9EQR5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.06■□□□□ 0.16
Lime1Q9EQR5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lime1Q9EQR5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.06■□□□□ 0.16
Lime1Q9EQR5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.06■□□□□ 0.16
Lime1Q9EQR5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.06■□□□□ 0.16
Lime1Q9EQR5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lime1Q9EQR5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lime1Q9EQR5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lime1Q9EQR5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lime1Q9EQR5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lime1Q9EQR5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Lime1Q9EQR5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lime1Q9EQR5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lime1Q9EQR5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.04■□□□□ 0.16
Lime1Q9EQR5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.04■□□□□ 0.16
Lime1Q9EQR5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lime1Q9EQR5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lime1Q9EQR5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms