Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upf1Q9EPU0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Upf1Q9EPU0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Upf1Q9EPU0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.18■□□□□ 0.98
Upf1Q9EPU0 Gm13884-201ENSMUST00000118103 829 ntBASIC21.18■□□□□ 0.98
Upf1Q9EPU0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Upf1Q9EPU0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Upf1Q9EPU0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upf1Q9EPU0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upf1Q9EPU0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upf1Q9EPU0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Upf1Q9EPU0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Gm13474-201ENSMUST00000122466 815 ntBASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Upf1Q9EPU0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upf1Q9EPU0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upf1Q9EPU0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Upf1Q9EPU0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upf1Q9EPU0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upf1Q9EPU0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Upf1Q9EPU0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upf1Q9EPU0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
Upf1Q9EPU0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upf1Q9EPU0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Upf1Q9EPU0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upf1Q9EPU0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Upf1Q9EPU0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Upf1Q9EPU0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upf1Q9EPU0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upf1Q9EPU0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Upf1Q9EPU0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upf1Q9EPU0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upf1Q9EPU0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Upf1Q9EPU0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Upf1Q9EPU0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Upf1Q9EPU0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upf1Q9EPU0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Upf1Q9EPU0 Gm18206-201ENSMUST00000207027 926 ntBASIC21.15■□□□□ 0.98
Upf1Q9EPU0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upf1Q9EPU0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Upf1Q9EPU0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Upf1Q9EPU0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Upf1Q9EPU0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Upf1Q9EPU0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC21.14■□□□□ 0.97
Upf1Q9EPU0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Upf1Q9EPU0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Upf1Q9EPU0 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.14■□□□□ 0.97
Upf1Q9EPU0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Upf1Q9EPU0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Upf1Q9EPU0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Upf1Q9EPU0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Upf1Q9EPU0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Upf1Q9EPU0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Upf1Q9EPU0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Upf1Q9EPU0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Upf1Q9EPU0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Gm27742-201ENSMUST00000184667 60 ntBASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Upf1Q9EPU0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Upf1Q9EPU0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upf1Q9EPU0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upf1Q9EPU0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upf1Q9EPU0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.11■□□□□ 0.97
Upf1Q9EPU0 Gm11950-201ENSMUST00000121615 838 ntBASIC21.11■□□□□ 0.97
Upf1Q9EPU0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC21.11■□□□□ 0.97
Upf1Q9EPU0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.11■□□□□ 0.97
Upf1Q9EPU0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Upf1Q9EPU0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upf1Q9EPU0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Upf1Q9EPU0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms