Protein–RNA interactions for Protein: Q9D7T1

Rep15, Rab15 effector protein, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rep15Q9D7T1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rep15Q9D7T1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rep15Q9D7T1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rep15Q9D7T1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rep15Q9D7T1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rep15Q9D7T1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rep15Q9D7T1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rep15Q9D7T1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rep15Q9D7T1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rep15Q9D7T1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rep15Q9D7T1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rep15Q9D7T1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rep15Q9D7T1 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.21■□□□□ 0.03
Rep15Q9D7T1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rep15Q9D7T1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.21■□□□□ 0.03
Rep15Q9D7T1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rep15Q9D7T1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rep15Q9D7T1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Rep15Q9D7T1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms