Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift27Q9D0P8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift27Q9D0P8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift27Q9D0P8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ift27Q9D0P8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ift27Q9D0P8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ift27Q9D0P8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.83■□□□□ 0.28
Ift27Q9D0P8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ift27Q9D0P8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ift27Q9D0P8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ift27Q9D0P8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ift27Q9D0P8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ift27Q9D0P8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ift27Q9D0P8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift27Q9D0P8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.82■□□□□ 0.28
Ift27Q9D0P8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ift27Q9D0P8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift27Q9D0P8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift27Q9D0P8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.82■□□□□ 0.28
Ift27Q9D0P8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift27Q9D0P8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift27Q9D0P8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift27Q9D0P8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift27Q9D0P8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift27Q9D0P8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift27Q9D0P8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift27Q9D0P8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ift27Q9D0P8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms