Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Shmt2Q9CZN7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shmt2Q9CZN7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shmt2Q9CZN7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shmt2Q9CZN7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Shmt2Q9CZN7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.6■□□□□ 0.41
Shmt2Q9CZN7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shmt2Q9CZN7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shmt2Q9CZN7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shmt2Q9CZN7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shmt2Q9CZN7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shmt2Q9CZN7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shmt2Q9CZN7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shmt2Q9CZN7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.58■□□□□ 0.41
Shmt2Q9CZN7 Gm13234-201ENSMUST00000120010 747 ntBASIC17.58■□□□□ 0.4
Shmt2Q9CZN7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shmt2Q9CZN7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shmt2Q9CZN7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Shmt2Q9CZN7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shmt2Q9CZN7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shmt2Q9CZN7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shmt2Q9CZN7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shmt2Q9CZN7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Reep4-203ENSMUST00000226563 1444 ntBASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shmt2Q9CZN7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shmt2Q9CZN7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Shmt2Q9CZN7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shmt2Q9CZN7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shmt2Q9CZN7 Gm7860-201ENSMUST00000121190 879 ntBASIC17.55■□□□□ 0.4
Shmt2Q9CZN7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.55■□□□□ 0.4
Shmt2Q9CZN7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Shmt2Q9CZN7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shmt2Q9CZN7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shmt2Q9CZN7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shmt2Q9CZN7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Shmt2Q9CZN7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shmt2Q9CZN7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shmt2Q9CZN7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shmt2Q9CZN7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shmt2Q9CZN7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.54■□□□□ 0.4
Shmt2Q9CZN7 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.54■□□□□ 0.4
Shmt2Q9CZN7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.54■□□□□ 0.4
Shmt2Q9CZN7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms