Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snf8Q9CZ28 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Snf8Q9CZ28 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Snf8Q9CZ28 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19■□□□□ 0.63
Snf8Q9CZ28 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19■□□□□ 0.63
Snf8Q9CZ28 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snf8Q9CZ28 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19■□□□□ 0.63
Snf8Q9CZ28 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Snf8Q9CZ28 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Snf8Q9CZ28 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snf8Q9CZ28 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snf8Q9CZ28 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snf8Q9CZ28 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Mir7075-201ENSMUST00000184187 82 ntBASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Snf8Q9CZ28 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.98■□□□□ 0.63
Snf8Q9CZ28 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snf8Q9CZ28 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Snf8Q9CZ28 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Gm43173-201ENSMUST00000202246 593 ntBASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snf8Q9CZ28 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.95■□□□□ 0.62
Snf8Q9CZ28 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snf8Q9CZ28 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Snf8Q9CZ28 Gm12821-201ENSMUST00000120022 600 ntBASIC18.95■□□□□ 0.62
Snf8Q9CZ28 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snf8Q9CZ28 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snf8Q9CZ28 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snf8Q9CZ28 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Snf8Q9CZ28 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Snf8Q9CZ28 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snf8Q9CZ28 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snf8Q9CZ28 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snf8Q9CZ28 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Snf8Q9CZ28 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms