Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.2■□□□□ 0.66
Rnf135Q9CWS1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rnf135Q9CWS1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf135Q9CWS1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf135Q9CWS1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf135Q9CWS1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rnf135Q9CWS1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf135Q9CWS1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Gm10033-202ENSMUST00000211874 928 ntBASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf135Q9CWS1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf135Q9CWS1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.17■□□□□ 0.66
Rnf135Q9CWS1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf135Q9CWS1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Rnf135Q9CWS1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf135Q9CWS1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.14■□□□□ 0.66
Rnf135Q9CWS1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf135Q9CWS1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf135Q9CWS1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf135Q9CWS1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf135Q9CWS1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rnf135Q9CWS1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf135Q9CWS1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf135Q9CWS1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf135Q9CWS1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf135Q9CWS1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms