Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot11Q9CWN7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot11Q9CWN7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot11Q9CWN7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cnot11Q9CWN7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Cnot11Q9CWN7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cnot11Q9CWN7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Cnot11Q9CWN7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Gm42778-201ENSMUST00000199644 553 ntBASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cnot11Q9CWN7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cnot11Q9CWN7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cnot11Q9CWN7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cnot11Q9CWN7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cnot11Q9CWN7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Gm5874-201ENSMUST00000096101 508 ntBASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cnot11Q9CWN7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cnot11Q9CWN7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cnot11Q9CWN7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Cnot11Q9CWN7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cnot11Q9CWN7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.93■□□□□ 0.46
Cnot11Q9CWN7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cnot11Q9CWN7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.93■□□□□ 0.46
Cnot11Q9CWN7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cnot11Q9CWN7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 Reep4-203ENSMUST00000226563 1444 ntBASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cnot11Q9CWN7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Gm18284-201ENSMUST00000172604 624 ntBASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Gm38205-201ENSMUST00000192243 258 ntBASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cnot11Q9CWN7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms