Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smc3Q9CW03 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.71■■□□□ 1.07
Smc3Q9CW03 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Smc3Q9CW03 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
Smc3Q9CW03 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.7■■□□□ 1.06
Smc3Q9CW03 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.7■■□□□ 1.06
Smc3Q9CW03 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc3Q9CW03 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Gm43060-201ENSMUST00000200621 289 ntBASIC21.69■■□□□ 1.06
Smc3Q9CW03 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc3Q9CW03 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc3Q9CW03 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc3Q9CW03 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.68■■□□□ 1.06
Smc3Q9CW03 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smc3Q9CW03 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc3Q9CW03 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.67■■□□□ 1.06
Smc3Q9CW03 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.67■■□□□ 1.06
Smc3Q9CW03 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc3Q9CW03 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Smc3Q9CW03 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc3Q9CW03 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Smc3Q9CW03 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc3Q9CW03 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms