Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 Gm10493-201ENSMUST00000097270 612 ntBASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc40Q9CRC8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Lrrc40Q9CRC8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.34■□□□□ 0.53
Lrrc40Q9CRC8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Lrrc40Q9CRC8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc40Q9CRC8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc40Q9CRC8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc40Q9CRC8 Gm42778-201ENSMUST00000199644 553 ntBASIC18.34■□□□□ 0.53
Lrrc40Q9CRC8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc40Q9CRC8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc40Q9CRC8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc40Q9CRC8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc40Q9CRC8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc40Q9CRC8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc40Q9CRC8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Lrrc40Q9CRC8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrc40Q9CRC8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrc40Q9CRC8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrc40Q9CRC8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc40Q9CRC8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc40Q9CRC8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc40Q9CRC8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc40Q9CRC8 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.33■□□□□ 0.52
Lrrc40Q9CRC8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc40Q9CRC8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Lrrc40Q9CRC8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc40Q9CRC8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc40Q9CRC8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Lrrc40Q9CRC8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc40Q9CRC8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc40Q9CRC8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.32■□□□□ 0.52
Lrrc40Q9CRC8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrc40Q9CRC8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Lrrc40Q9CRC8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrc40Q9CRC8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.31■□□□□ 0.52
Lrrc40Q9CRC8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Lrrc40Q9CRC8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.31■□□□□ 0.52
Lrrc40Q9CRC8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.31■□□□□ 0.52
Lrrc40Q9CRC8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrc40Q9CRC8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrc40Q9CRC8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrc40Q9CRC8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrc40Q9CRC8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc40Q9CRC8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc40Q9CRC8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc40Q9CRC8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.3■□□□□ 0.52
Lrrc40Q9CRC8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.3■□□□□ 0.52
Lrrc40Q9CRC8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc40Q9CRC8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.3■□□□□ 0.52
Lrrc40Q9CRC8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.3■□□□□ 0.52
Lrrc40Q9CRC8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc40Q9CRC8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc40Q9CRC8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc40Q9CRC8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc40Q9CRC8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lrrc40Q9CRC8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms