Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm5049-201ENSMUST00000195878 1590 ntBASIC9.91□□□□□ -0.82
Sec61bQ9CQS8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61bQ9CQS8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61bQ9CQS8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61bQ9CQS8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61bQ9CQS8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61bQ9CQS8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC9.91□□□□□ -0.82
Sec61bQ9CQS8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61bQ9CQS8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61bQ9CQS8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61bQ9CQS8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 Gm26971-201ENSMUST00000182423 1072 ntBASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61bQ9CQS8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61bQ9CQS8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61bQ9CQS8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61bQ9CQS8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61bQ9CQS8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Sec61bQ9CQS8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Gm27275-201ENSMUST00000184318 272 ntBASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Gm10710-201ENSMUST00000047876 3971 ntBASIC9.89□□□□□ -0.83
Sec61bQ9CQS8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Gm5643-201ENSMUST00000117081 966 ntBASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Gm13181-201ENSMUST00000120117 1069 ntBASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Mir6982-201ENSMUST00000184354 68 ntBASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 AC154649.1-201ENSMUST00000227392 384 ntBASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Dio3-201ENSMUST00000097228 1449 ntBASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sec61bQ9CQS8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Gm32699-201ENSMUST00000221728 1988 ntBASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Gm15847-201ENSMUST00000121417 1065 ntBASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Gm15378-201ENSMUST00000121894 207 ntBASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms