Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm7Q9CQQ8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Lsm7Q9CQQ8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm7Q9CQQ8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm7Q9CQQ8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm7Q9CQQ8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Lsm7Q9CQQ8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm7Q9CQQ8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm7Q9CQQ8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Lsm7Q9CQQ8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm7Q9CQQ8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm7Q9CQQ8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm7Q9CQQ8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm7Q9CQQ8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Lsm7Q9CQQ8 Gm22240-201ENSMUST00000175225 82 ntBASIC18.66■□□□□ 0.58
Lsm7Q9CQQ8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.66■□□□□ 0.58
Lsm7Q9CQQ8 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.66■□□□□ 0.58
Lsm7Q9CQQ8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm7Q9CQQ8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm7Q9CQQ8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Lsm7Q9CQQ8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm7Q9CQQ8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm7Q9CQQ8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.65■□□□□ 0.58
Lsm7Q9CQQ8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Lsm7Q9CQQ8 Gm13168-201ENSMUST00000121771 632 ntBASIC18.65■□□□□ 0.58
Lsm7Q9CQQ8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm7Q9CQQ8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm7Q9CQQ8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.65■□□□□ 0.58
Lsm7Q9CQQ8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm7Q9CQQ8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm7Q9CQQ8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Lsm7Q9CQQ8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lsm7Q9CQQ8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Lsm7Q9CQQ8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm7Q9CQQ8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm7Q9CQQ8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm7Q9CQQ8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm7Q9CQQ8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lsm7Q9CQQ8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm7Q9CQQ8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.64■□□□□ 0.57
Lsm7Q9CQQ8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm7Q9CQQ8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm7Q9CQQ8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm7Q9CQQ8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm7Q9CQQ8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm7Q9CQQ8 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.63■□□□□ 0.57
Lsm7Q9CQQ8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm7Q9CQQ8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm7Q9CQQ8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.63■□□□□ 0.57
Lsm7Q9CQQ8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm7Q9CQQ8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lsm7Q9CQQ8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lsm7Q9CQQ8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Gm27275-201ENSMUST00000184318 272 ntBASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lsm7Q9CQQ8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm7Q9CQQ8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm7Q9CQQ8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm7Q9CQQ8 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.61■□□□□ 0.57
Lsm7Q9CQQ8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm7Q9CQQ8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm7Q9CQQ8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm7Q9CQQ8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm7Q9CQQ8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm7Q9CQQ8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm7Q9CQQ8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm7Q9CQQ8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm7Q9CQQ8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm7Q9CQQ8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm7Q9CQQ8 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.6■□□□□ 0.57
Lsm7Q9CQQ8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm7Q9CQQ8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Lsm7Q9CQQ8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms