Protein–RNA interactions for Protein: Q9CQM1

Type III endosome membrane protein TEMP, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQM1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CQM1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Q9CQM1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.47■□□□□ 0.39
Q9CQM1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Q9CQM1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.47■□□□□ 0.39
Q9CQM1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CQM1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CQM1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Q9CQM1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Q9CQM1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Q9CQM1 Gm7284-201ENSMUST00000131667 944 ntBASIC17.46■□□□□ 0.39
Q9CQM1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.46■□□□□ 0.39
Q9CQM1 Gm38285-201ENSMUST00000192928 922 ntBASIC17.46■□□□□ 0.39
Q9CQM1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.46■□□□□ 0.39
Q9CQM1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CQM1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CQM1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CQM1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CQM1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CQM1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Q9CQM1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Q9CQM1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Q9CQM1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.45■□□□□ 0.38
Q9CQM1 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.45■□□□□ 0.38
Q9CQM1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.45■□□□□ 0.38
Q9CQM1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Q9CQM1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Q9CQM1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CQM1 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.44■□□□□ 0.38
Q9CQM1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Q9CQM1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.44■□□□□ 0.38
Q9CQM1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQM1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQM1 Gm25016-201ENSMUST00000158399 131 ntBASIC17.44■□□□□ 0.38
Q9CQM1 Gm22697-201ENSMUST00000175194 63 ntBASIC17.44■□□□□ 0.38
Q9CQM1 Mir6349-201ENSMUST00000184059 97 ntBASIC17.44■□□□□ 0.38
Q9CQM1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.44■□□□□ 0.38
Q9CQM1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.44■□□□□ 0.38
Q9CQM1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Q9CQM1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQM1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQM1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Q9CQM1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQM1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQM1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Q9CQM1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQM1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQM1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQM1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQM1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.43■□□□□ 0.38
Q9CQM1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQM1 Gm17661-201ENSMUST00000170317 270 ntBASIC17.43■□□□□ 0.38
Q9CQM1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQM1 Gm2274-201ENSMUST00000184539 609 ntBASIC17.43■□□□□ 0.38
Q9CQM1 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.43■□□□□ 0.38
Q9CQM1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQM1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.43■□□□□ 0.38
Q9CQM1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQM1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQM1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.42■□□□□ 0.38
Q9CQM1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Q9CQM1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.42■□□□□ 0.38
Q9CQM1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQM1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.42■□□□□ 0.38
Q9CQM1 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.42■□□□□ 0.38
Q9CQM1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQM1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQM1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.42■□□□□ 0.38
Q9CQM1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQM1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Q9CQM1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CQM1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CQM1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CQM1 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms