Protein–RNA interactions for Protein: Q9CPZ1

Ccdc198, Uncharacterized protein CCDC198, mousemouse

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc198Q9CPZ1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ccdc198Q9CPZ1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc198Q9CPZ1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc198Q9CPZ1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc198Q9CPZ1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Gm13234-201ENSMUST00000120010 747 ntBASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Gm27405-201ENSMUST00000184201 112 ntBASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc198Q9CPZ1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc198Q9CPZ1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Gm7291-201ENSMUST00000199147 382 ntBASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 AV356131-201ENSMUST00000206201 750 ntBASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc198Q9CPZ1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Gm10033-202ENSMUST00000211874 928 ntBASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc198Q9CPZ1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Reep4-203ENSMUST00000226563 1444 ntBASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ccdc198Q9CPZ1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Gm26571-201ENSMUST00000181399 666 ntBASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc198Q9CPZ1 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms