Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 Rarb-207ENSMUST00000225921 2756 ntBASIC18.24■□□□□ 0.51
Trim33Q99PP7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim33Q99PP7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Nespas-201ENSMUST00000143738 1083 ntBASIC18.23■□□□□ 0.51
Trim33Q99PP7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trim33Q99PP7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trim33Q99PP7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim33Q99PP7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim33Q99PP7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim33Q99PP7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Trim33Q99PP7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim33Q99PP7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim33Q99PP7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.22■□□□□ 0.51
Trim33Q99PP7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim33Q99PP7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim33Q99PP7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim33Q99PP7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Trim33Q99PP7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim33Q99PP7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim33Q99PP7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.21■□□□□ 0.51
Trim33Q99PP7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim33Q99PP7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim33Q99PP7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim33Q99PP7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim33Q99PP7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim33Q99PP7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.21■□□□□ 0.51
Trim33Q99PP7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim33Q99PP7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim33Q99PP7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim33Q99PP7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim33Q99PP7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim33Q99PP7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim33Q99PP7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim33Q99PP7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim33Q99PP7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim33Q99PP7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim33Q99PP7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim33Q99PP7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim33Q99PP7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim33Q99PP7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim33Q99PP7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.2■□□□□ 0.5
Trim33Q99PP7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim33Q99PP7 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.2■□□□□ 0.5
Trim33Q99PP7 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.2■□□□□ 0.5
Trim33Q99PP7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim33Q99PP7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim33Q99PP7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim33Q99PP7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim33Q99PP7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim33Q99PP7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim33Q99PP7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim33Q99PP7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim33Q99PP7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim33Q99PP7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim33Q99PP7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim33Q99PP7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim33Q99PP7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim33Q99PP7 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.19■□□□□ 0.5
Trim33Q99PP7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim33Q99PP7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim33Q99PP7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trim33Q99PP7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim33Q99PP7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.18■□□□□ 0.5
Trim33Q99PP7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms