Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Msh4Q99MT2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Msh4Q99MT2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh4Q99MT2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh4Q99MT2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh4Q99MT2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh4Q99MT2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.97■□□□□ 0.47
Msh4Q99MT2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Msh4Q99MT2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh4Q99MT2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Msh4Q99MT2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Msh4Q99MT2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh4Q99MT2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Msh4Q99MT2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh4Q99MT2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh4Q99MT2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Msh4Q99MT2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh4Q99MT2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Msh4Q99MT2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
Msh4Q99MT2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh4Q99MT2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Msh4Q99MT2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Msh4Q99MT2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Msh4Q99MT2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Msh4Q99MT2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh4Q99MT2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Msh4Q99MT2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh4Q99MT2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh4Q99MT2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Msh4Q99MT2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh4Q99MT2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh4Q99MT2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh4Q99MT2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh4Q99MT2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh4Q99MT2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh4Q99MT2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh4Q99MT2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh4Q99MT2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Msh4Q99MT2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh4Q99MT2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh4Q99MT2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Msh4Q99MT2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Msh4Q99MT2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh4Q99MT2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh4Q99MT2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh4Q99MT2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh4Q99MT2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh4Q99MT2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh4Q99MT2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh4Q99MT2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh4Q99MT2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh4Q99MT2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Msh4Q99MT2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh4Q99MT2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Msh4Q99MT2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.92■□□□□ 0.46
Msh4Q99MT2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Msh4Q99MT2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh4Q99MT2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh4Q99MT2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh4Q99MT2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh4Q99MT2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh4Q99MT2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh4Q99MT2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh4Q99MT2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh4Q99MT2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.91■□□□□ 0.46
Msh4Q99MT2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Msh4Q99MT2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh4Q99MT2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh4Q99MT2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh4Q99MT2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh4Q99MT2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh4Q99MT2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh4Q99MT2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Msh4Q99MT2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.9■□□□□ 0.46
Msh4Q99MT2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh4Q99MT2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh4Q99MT2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh4Q99MT2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh4Q99MT2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Msh4Q99MT2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.9■□□□□ 0.46
Msh4Q99MT2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Msh4Q99MT2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Msh4Q99MT2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh4Q99MT2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Msh4Q99MT2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh4Q99MT2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Msh4Q99MT2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Msh4Q99MT2 Gm13534-201ENSMUST00000121169 513 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms