Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 Gm13559-201ENSMUST00000120476 863 ntBASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-1Q99MA9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Gm11539-201ENSMUST00000119837 557 ntBASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Gm13436-201ENSMUST00000120418 567 ntBASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Gm6659-201ENSMUST00000174752 547 ntBASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-1Q99MA9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.29■□□□□ 0.36
Nkx6-1Q99MA9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-1Q99MA9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-1Q99MA9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-1Q99MA9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-1Q99MA9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-1Q99MA9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-1Q99MA9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.29■□□□□ 0.36
Nkx6-1Q99MA9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-1Q99MA9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-1Q99MA9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Gm7889-201ENSMUST00000185591 958 ntBASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-1Q99MA9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx6-1Q99MA9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx6-1Q99MA9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Nkx6-1Q99MA9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx6-1Q99MA9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx6-1Q99MA9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx6-1Q99MA9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.26■□□□□ 0.35
Nkx6-1Q99MA9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nkx6-1Q99MA9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-1Q99MA9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nkx6-1Q99MA9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-1Q99MA9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-1Q99MA9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.25■□□□□ 0.35
Nkx6-1Q99MA9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-1Q99MA9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nkx6-1Q99MA9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-1Q99MA9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms