Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cstf1Q99LC2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cstf1Q99LC2 Gm30025-201ENSMUST00000218555 728 ntBASIC18.42■□□□□ 0.54
Cstf1Q99LC2 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.42■□□□□ 0.54
Cstf1Q99LC2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cstf1Q99LC2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cstf1Q99LC2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cstf1Q99LC2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cstf1Q99LC2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cstf1Q99LC2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cstf1Q99LC2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cstf1Q99LC2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cstf1Q99LC2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cstf1Q99LC2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cstf1Q99LC2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cstf1Q99LC2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cstf1Q99LC2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cstf1Q99LC2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cstf1Q99LC2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cstf1Q99LC2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.41■□□□□ 0.54
Cstf1Q99LC2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cstf1Q99LC2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cstf1Q99LC2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cstf1Q99LC2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cstf1Q99LC2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.4■□□□□ 0.54
Cstf1Q99LC2 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cstf1Q99LC2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Cstf1Q99LC2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.39■□□□□ 0.53
Cstf1Q99LC2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cstf1Q99LC2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cstf1Q99LC2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.39■□□□□ 0.53
Cstf1Q99LC2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.39■□□□□ 0.53
Cstf1Q99LC2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cstf1Q99LC2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cstf1Q99LC2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.39■□□□□ 0.53
Cstf1Q99LC2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cstf1Q99LC2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cstf1Q99LC2 Flg-201ENSMUST00000050758 1488 ntBASIC18.39■□□□□ 0.53
Cstf1Q99LC2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cstf1Q99LC2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cstf1Q99LC2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cstf1Q99LC2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cstf1Q99LC2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cstf1Q99LC2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cstf1Q99LC2 Gm11927-201ENSMUST00000118472 759 ntBASIC18.38■□□□□ 0.53
Cstf1Q99LC2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cstf1Q99LC2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cstf1Q99LC2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cstf1Q99LC2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.38■□□□□ 0.53
Cstf1Q99LC2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.38■□□□□ 0.53
Cstf1Q99LC2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.38■□□□□ 0.53
Cstf1Q99LC2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.38■□□□□ 0.53
Cstf1Q99LC2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cstf1Q99LC2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cstf1Q99LC2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cstf1Q99LC2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cstf1Q99LC2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cstf1Q99LC2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cstf1Q99LC2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms