Protein–RNA interactions for Protein: Q99KR6

Rnf34, E3 ubiquitin-protein ligase RNF34, mousemouse

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf34Q99KR6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf34Q99KR6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Rnf34Q99KR6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.82■□□□□ 0.76
Rnf34Q99KR6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf34Q99KR6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf34Q99KR6 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.82■□□□□ 0.76
Rnf34Q99KR6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.82■□□□□ 0.76
Rnf34Q99KR6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf34Q99KR6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf34Q99KR6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf34Q99KR6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf34Q99KR6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf34Q99KR6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Gm11421-201ENSMUST00000122124 294 ntBASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf34Q99KR6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Gm7860-201ENSMUST00000121190 879 ntBASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf34Q99KR6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rnf34Q99KR6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf34Q99KR6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf34Q99KR6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf34Q99KR6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.79■□□□□ 0.76
Rnf34Q99KR6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.79■□□□□ 0.76
Rnf34Q99KR6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf34Q99KR6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.79■□□□□ 0.76
Rnf34Q99KR6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rnf34Q99KR6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf34Q99KR6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf34Q99KR6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf34Q99KR6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rnf34Q99KR6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf34Q99KR6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf34Q99KR6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf34Q99KR6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf34Q99KR6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Smad6-203ENSMUST00000179458 273 ntBASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf34Q99KR6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf34Q99KR6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rnf34Q99KR6 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.76■□□□□ 0.75
Rnf34Q99KR6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf34Q99KR6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf34Q99KR6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf34Q99KR6 Mir7075-201ENSMUST00000184187 82 ntBASIC19.76■□□□□ 0.75
Rnf34Q99KR6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf34Q99KR6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf34Q99KR6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf34Q99KR6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf34Q99KR6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf34Q99KR6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.75■□□□□ 0.75
Rnf34Q99KR6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rnf34Q99KR6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms