Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Usp11Q99K46 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Usp11Q99K46 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp11Q99K46 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Usp11Q99K46 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp11Q99K46 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Usp11Q99K46 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Usp11Q99K46 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Usp11Q99K46 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.39■□□□□ 0.69
Usp11Q99K46 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 Gm13234-201ENSMUST00000120010 747 ntBASIC19.39■□□□□ 0.69
Usp11Q99K46 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Usp11Q99K46 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Usp11Q99K46 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp11Q99K46 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Usp11Q99K46 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Usp11Q99K46 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.38■□□□□ 0.69
Usp11Q99K46 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp11Q99K46 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.38■□□□□ 0.69
Usp11Q99K46 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp11Q99K46 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp11Q99K46 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp11Q99K46 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp11Q99K46 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp11Q99K46 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp11Q99K46 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.37■□□□□ 0.69
Usp11Q99K46 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Usp11Q99K46 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp11Q99K46 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp11Q99K46 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp11Q99K46 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp11Q99K46 Gm10033-202ENSMUST00000211874 928 ntBASIC19.37■□□□□ 0.69
Usp11Q99K46 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp11Q99K46 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp11Q99K46 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp11Q99K46 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp11Q99K46 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp11Q99K46 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp11Q99K46 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp11Q99K46 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp11Q99K46 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp11Q99K46 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.36■□□□□ 0.69
Usp11Q99K46 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp11Q99K46 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp11Q99K46 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Usp11Q99K46 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp11Q99K46 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp11Q99K46 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp11Q99K46 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.36■□□□□ 0.69
Usp11Q99K46 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp11Q99K46 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.36■□□□□ 0.69
Usp11Q99K46 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp11Q99K46 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Usp11Q99K46 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp11Q99K46 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp11Q99K46 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.36■□□□□ 0.69
Usp11Q99K46 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp11Q99K46 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp11Q99K46 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Usp11Q99K46 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Usp11Q99K46 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.35■□□□□ 0.69
Usp11Q99K46 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp11Q99K46 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Usp11Q99K46 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp11Q99K46 Gm7860-201ENSMUST00000121190 879 ntBASIC19.35■□□□□ 0.69
Usp11Q99K46 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.35■□□□□ 0.69
Usp11Q99K46 Gm38205-201ENSMUST00000192243 258 ntBASIC19.35■□□□□ 0.69
Usp11Q99K46 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
Usp11Q99K46 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp11Q99K46 Gm18671-201ENSMUST00000214826 683 ntBASIC19.35■□□□□ 0.69
Usp11Q99K46 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp11Q99K46 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Usp11Q99K46 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp11Q99K46 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Usp11Q99K46 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp11Q99K46 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp11Q99K46 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp11Q99K46 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp11Q99K46 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp11Q99K46 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.34■□□□□ 0.69
Usp11Q99K46 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp11Q99K46 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp11Q99K46 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp11Q99K46 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp11Q99K46 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp11Q99K46 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp11Q99K46 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp11Q99K46 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Usp11Q99K46 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms