Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.86■□□□□ 0.29
Lims1Q99JW4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.86■□□□□ 0.29
Lims1Q99JW4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.86■□□□□ 0.29
Lims1Q99JW4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.86■□□□□ 0.29
Lims1Q99JW4 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.86■□□□□ 0.29
Lims1Q99JW4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lims1Q99JW4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.86■□□□□ 0.29
Lims1Q99JW4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.85■□□□□ 0.29
Lims1Q99JW4 Gm45417-201ENSMUST00000209533 758 ntBASIC16.85■□□□□ 0.29
Lims1Q99JW4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims1Q99JW4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims1Q99JW4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lims1Q99JW4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.83■□□□□ 0.29
Lims1Q99JW4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lims1Q99JW4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lims1Q99JW4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.83■□□□□ 0.29
Lims1Q99JW4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lims1Q99JW4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.83■□□□□ 0.28
Lims1Q99JW4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lims1Q99JW4 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.83■□□□□ 0.28
Lims1Q99JW4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lims1Q99JW4 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.83■□□□□ 0.28
Lims1Q99JW4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.83■□□□□ 0.28
Lims1Q99JW4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Lims1Q99JW4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims1Q99JW4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims1Q99JW4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims1Q99JW4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims1Q99JW4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lims1Q99JW4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lims1Q99JW4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims1Q99JW4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims1Q99JW4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lims1Q99JW4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lims1Q99JW4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.82■□□□□ 0.28
Lims1Q99JW4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lims1Q99JW4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lims1Q99JW4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lims1Q99JW4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lims1Q99JW4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.82■□□□□ 0.28
Lims1Q99JW4 Gm43017-201ENSMUST00000198296 752 ntBASIC16.82■□□□□ 0.28
Lims1Q99JW4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lims1Q99JW4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lims1Q99JW4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims1Q99JW4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims1Q99JW4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims1Q99JW4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims1Q99JW4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.81■□□□□ 0.28
Lims1Q99JW4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims1Q99JW4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.81■□□□□ 0.28
Lims1Q99JW4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims1Q99JW4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.81■□□□□ 0.28
Lims1Q99JW4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims1Q99JW4 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.8■□□□□ 0.28
Lims1Q99JW4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.8■□□□□ 0.28
Lims1Q99JW4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.8■□□□□ 0.28
Lims1Q99JW4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lims1Q99JW4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms