Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Gm10138-203ENSMUST00000206952 366 ntBASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Smarcd2Q99JR8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Gm9987-201ENSMUST00000069768 567 ntBASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Smarcd2Q99JR8 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.7■□□□□ 0.58
Smarcd2Q99JR8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.7■□□□□ 0.58
Smarcd2Q99JR8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd2Q99JR8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smarcd2Q99JR8 Gm5417-201ENSMUST00000079706 384 ntBASIC18.7■□□□□ 0.58
Smarcd2Q99JR8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd2Q99JR8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smarcd2Q99JR8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smarcd2Q99JR8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcd2Q99JR8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smarcd2Q99JR8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Gm43183-201ENSMUST00000200632 547 ntBASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd2Q99JR8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd2Q99JR8 Golph3-202ENSMUST00000226517 2359 ntBASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 Gm15375-201ENSMUST00000119510 849 ntBASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd2Q99JR8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd2Q99JR8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd2Q99JR8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd2Q99JR8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.66■□□□□ 0.58
Smarcd2Q99JR8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.66■□□□□ 0.58
Smarcd2Q99JR8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.66■□□□□ 0.58
Smarcd2Q99JR8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smarcd2Q99JR8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd2Q99JR8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd2Q99JR8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd2Q99JR8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms