Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.56■□□□□ 0.56
Cdk9Q99J95 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk9Q99J95 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk9Q99J95 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk9Q99J95 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk9Q99J95 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.55■□□□□ 0.56
Cdk9Q99J95 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.55■□□□□ 0.56
Cdk9Q99J95 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk9Q99J95 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk9Q99J95 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk9Q99J95 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk9Q99J95 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdk9Q99J95 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.54■□□□□ 0.56
Cdk9Q99J95 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk9Q99J95 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk9Q99J95 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.54■□□□□ 0.56
Cdk9Q99J95 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdk9Q99J95 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk9Q99J95 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk9Q99J95 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk9Q99J95 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
Cdk9Q99J95 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk9Q99J95 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk9Q99J95 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk9Q99J95 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk9Q99J95 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdk9Q99J95 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cdk9Q99J95 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk9Q99J95 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk9Q99J95 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk9Q99J95 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdk9Q99J95 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Cdk9Q99J95 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk9Q99J95 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cdk9Q99J95 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk9Q99J95 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.52■□□□□ 0.56
Cdk9Q99J95 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.52■□□□□ 0.56
Cdk9Q99J95 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdk9Q99J95 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdk9Q99J95 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdk9Q99J95 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdk9Q99J95 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdk9Q99J95 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdk9Q99J95 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.51■□□□□ 0.55
Cdk9Q99J95 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk9Q99J95 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk9Q99J95 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk9Q99J95 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk9Q99J95 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk9Q99J95 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdk9Q99J95 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.51■□□□□ 0.55
Cdk9Q99J95 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk9Q99J95 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk9Q99J95 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk9Q99J95 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk9Q99J95 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk9Q99J95 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdk9Q99J95 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdk9Q99J95 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdk9Q99J95 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cdk9Q99J95 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdk9Q99J95 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdk9Q99J95 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdk9Q99J95 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cdk9Q99J95 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms