Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col20a1Q923P0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col20a1Q923P0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.84■■□□□ 1.09
Col20a1Q923P0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Col20a1Q923P0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col20a1Q923P0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col20a1Q923P0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col20a1Q923P0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Col20a1Q923P0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Col20a1Q923P0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col20a1Q923P0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col20a1Q923P0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col20a1Q923P0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col20a1Q923P0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Col20a1Q923P0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Col20a1Q923P0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col20a1Q923P0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col20a1Q923P0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col20a1Q923P0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col20a1Q923P0 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.83■■□□□ 1.09
Col20a1Q923P0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Col20a1Q923P0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.83■■□□□ 1.09
Col20a1Q923P0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.83■■□□□ 1.09
Col20a1Q923P0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Col20a1Q923P0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col20a1Q923P0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Col20a1Q923P0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Col20a1Q923P0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col20a1Q923P0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col20a1Q923P0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col20a1Q923P0 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.82■■□□□ 1.08
Col20a1Q923P0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Col20a1Q923P0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col20a1Q923P0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Col20a1Q923P0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Col20a1Q923P0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.82■■□□□ 1.08
Col20a1Q923P0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col20a1Q923P0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col20a1Q923P0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col20a1Q923P0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Col20a1Q923P0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Col20a1Q923P0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col20a1Q923P0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col20a1Q923P0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col20a1Q923P0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Col20a1Q923P0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.81■■□□□ 1.08
Col20a1Q923P0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Col20a1Q923P0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.81■■□□□ 1.08
Col20a1Q923P0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.8■■□□□ 1.08
Col20a1Q923P0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col20a1Q923P0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col20a1Q923P0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col20a1Q923P0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col20a1Q923P0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col20a1Q923P0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
Col20a1Q923P0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.8■■□□□ 1.08
Col20a1Q923P0 Zfp783-201ENSMUST00000095946 670 ntBASIC21.8■■□□□ 1.08
Col20a1Q923P0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col20a1Q923P0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col20a1Q923P0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col20a1Q923P0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col20a1Q923P0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col20a1Q923P0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Col20a1Q923P0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col20a1Q923P0 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.79■■□□□ 1.08
Col20a1Q923P0 Gm10698-201ENSMUST00000182663 604 ntBASIC21.79■■□□□ 1.08
Col20a1Q923P0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Col20a1Q923P0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col20a1Q923P0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col20a1Q923P0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col20a1Q923P0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.78■■□□□ 1.08
Col20a1Q923P0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col20a1Q923P0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col20a1Q923P0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Col20a1Q923P0 Gm15378-201ENSMUST00000121894 207 ntBASIC21.78■■□□□ 1.08
Col20a1Q923P0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col20a1Q923P0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.78■■□□□ 1.08
Col20a1Q923P0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col20a1Q923P0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col20a1Q923P0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col20a1Q923P0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.77■■□□□ 1.08
Col20a1Q923P0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col20a1Q923P0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col20a1Q923P0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.77■■□□□ 1.08
Col20a1Q923P0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Col20a1Q923P0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col20a1Q923P0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col20a1Q923P0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Col20a1Q923P0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.77■■□□□ 1.07
Col20a1Q923P0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.77■■□□□ 1.07
Col20a1Q923P0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.77■■□□□ 1.07
Col20a1Q923P0 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.77■■□□□ 1.07
Col20a1Q923P0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Col20a1Q923P0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.77■■□□□ 1.07
Col20a1Q923P0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col20a1Q923P0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col20a1Q923P0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col20a1Q923P0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.76■■□□□ 1.07
Col20a1Q923P0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col20a1Q923P0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms