Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha8Q91Y12 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha8Q91Y12 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha8Q91Y12 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha8Q91Y12 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pcdha8Q91Y12 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha8Q91Y12 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha8Q91Y12 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.96■□□□□ 0.47
Pcdha8Q91Y12 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdha8Q91Y12 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdha8Q91Y12 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Gm13534-201ENSMUST00000121169 513 ntBASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha8Q91Y12 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Gm18284-201ENSMUST00000172604 624 ntBASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Gm18671-201ENSMUST00000214826 683 ntBASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdha8Q91Y12 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Gm10033-202ENSMUST00000211874 928 ntBASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha8Q91Y12 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Gm42642-201ENSMUST00000200683 355 ntBASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha8Q91Y12 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha8Q91Y12 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha8Q91Y12 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha8Q91Y12 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha8Q91Y12 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdha8Q91Y12 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.91■□□□□ 0.46
Pcdha8Q91Y12 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.91■□□□□ 0.46
Pcdha8Q91Y12 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha8Q91Y12 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha8Q91Y12 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdha8Q91Y12 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Pcdha8Q91Y12 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdha8Q91Y12 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha8Q91Y12 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha8Q91Y12 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha8Q91Y12 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms