Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 Nespas-201ENSMUST00000143738 1083 ntBASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb1Q91Y08 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb1Q91Y08 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb1Q91Y08 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb1Q91Y08 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb1Q91Y08 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb1Q91Y08 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.18■□□□□ 0.66
Pcdhb1Q91Y08 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb1Q91Y08 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 Gm10849-201ENSMUST00000100397 618 ntBASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.17■□□□□ 0.66
Pcdhb1Q91Y08 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 Gm8495-201ENSMUST00000188740 694 ntBASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb1Q91Y08 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb1Q91Y08 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb1Q91Y08 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdhb1Q91Y08 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Pcdhb1Q91Y08 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb1Q91Y08 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdhb1Q91Y08 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb1Q91Y08 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdhb1Q91Y08 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb1Q91Y08 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb1Q91Y08 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb1Q91Y08 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 Gm26571-201ENSMUST00000181399 666 ntBASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb1Q91Y08 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms