Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19■□□□□ 0.63
Pcdhb6Q91XZ4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19■□□□□ 0.63
Pcdhb6Q91XZ4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19■□□□□ 0.63
Pcdhb6Q91XZ4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb6Q91XZ4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb6Q91XZ4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb6Q91XZ4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19■□□□□ 0.63
Pcdhb6Q91XZ4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb6Q91XZ4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb6Q91XZ4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb6Q91XZ4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdhb6Q91XZ4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb6Q91XZ4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb6Q91XZ4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb6Q91XZ4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.99■□□□□ 0.63
Pcdhb6Q91XZ4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb6Q91XZ4 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.99■□□□□ 0.63
Pcdhb6Q91XZ4 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.99■□□□□ 0.63
Pcdhb6Q91XZ4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb6Q91XZ4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhb6Q91XZ4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb6Q91XZ4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb6Q91XZ4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb6Q91XZ4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.98■□□□□ 0.63
Pcdhb6Q91XZ4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb6Q91XZ4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb6Q91XZ4 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.98■□□□□ 0.63
Pcdhb6Q91XZ4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb6Q91XZ4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb6Q91XZ4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb6Q91XZ4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb6Q91XZ4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb6Q91XZ4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.97■□□□□ 0.63
Pcdhb6Q91XZ4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb6Q91XZ4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb6Q91XZ4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb6Q91XZ4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb6Q91XZ4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb6Q91XZ4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb6Q91XZ4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb6Q91XZ4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.96■□□□□ 0.63
Pcdhb6Q91XZ4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb6Q91XZ4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb6Q91XZ4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb6Q91XZ4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb6Q91XZ4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb6Q91XZ4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Gm42569-201ENSMUST00000200539 472 ntBASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb6Q91XZ4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb6Q91XZ4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb6Q91XZ4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb6Q91XZ4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhb6Q91XZ4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdhb6Q91XZ4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb6Q91XZ4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pcdhb6Q91XZ4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb6Q91XZ4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb6Q91XZ4 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.93■□□□□ 0.62
Pcdhb6Q91XZ4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb6Q91XZ4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb6Q91XZ4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Pcdhb6Q91XZ4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb6Q91XZ4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb6Q91XZ4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pcdhb6Q91XZ4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.92■□□□□ 0.62
Pcdhb6Q91XZ4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb6Q91XZ4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.92■□□□□ 0.62
Pcdhb6Q91XZ4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb6Q91XZ4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb6Q91XZ4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb6Q91XZ4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb6Q91XZ4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb6Q91XZ4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms