Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Sh3d19Q91X43 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Sh3d19Q91X43 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d19Q91X43 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.27■□□□□ 0.68
Sh3d19Q91X43 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d19Q91X43 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d19Q91X43 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d19Q91X43 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.27■□□□□ 0.68
Sh3d19Q91X43 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Sh3d19Q91X43 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d19Q91X43 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.27■□□□□ 0.67
Sh3d19Q91X43 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3d19Q91X43 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.26■□□□□ 0.67
Sh3d19Q91X43 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Sh3d19Q91X43 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d19Q91X43 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d19Q91X43 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d19Q91X43 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.26■□□□□ 0.67
Sh3d19Q91X43 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d19Q91X43 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d19Q91X43 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d19Q91X43 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d19Q91X43 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3d19Q91X43 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d19Q91X43 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d19Q91X43 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d19Q91X43 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.25■□□□□ 0.67
Sh3d19Q91X43 Gm8520-201ENSMUST00000186517 868 ntBASIC19.25■□□□□ 0.67
Sh3d19Q91X43 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.25■□□□□ 0.67
Sh3d19Q91X43 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d19Q91X43 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d19Q91X43 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d19Q91X43 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d19Q91X43 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d19Q91X43 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3d19Q91X43 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.24■□□□□ 0.67
Sh3d19Q91X43 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d19Q91X43 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d19Q91X43 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d19Q91X43 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.23■□□□□ 0.67
Sh3d19Q91X43 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sh3d19Q91X43 Gm2399-201ENSMUST00000104944 225 ntBASIC19.23■□□□□ 0.67
Sh3d19Q91X43 Gm11249-201ENSMUST00000117071 859 ntBASIC19.23■□□□□ 0.67
Sh3d19Q91X43 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.23■□□□□ 0.67
Sh3d19Q91X43 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.23■□□□□ 0.67
Sh3d19Q91X43 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d19Q91X43 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d19Q91X43 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3d19Q91X43 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.22■□□□□ 0.67
Sh3d19Q91X43 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3d19Q91X43 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Gm13168-201ENSMUST00000121771 632 ntBASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Gm22240-201ENSMUST00000175225 82 ntBASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3d19Q91X43 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3d19Q91X43 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.2■□□□□ 0.66
Sh3d19Q91X43 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3d19Q91X43 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms