Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh18Q8VHR0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Spcs1-204ENSMUST00000226782 949 ntBASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh18Q8VHR0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh18Q8VHR0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdh18Q8VHR0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Pcdh18Q8VHR0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh18Q8VHR0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdh18Q8VHR0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh18Q8VHR0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh18Q8VHR0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh18Q8VHR0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh18Q8VHR0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh18Q8VHR0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdh18Q8VHR0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh18Q8VHR0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh18Q8VHR0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh18Q8VHR0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms