Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40cQ8VHQ4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rab40cQ8VHQ4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40cQ8VHQ4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40cQ8VHQ4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40cQ8VHQ4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40cQ8VHQ4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.06■□□□□ 0
Rab40cQ8VHQ4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rab40cQ8VHQ4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rab40cQ8VHQ4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Rab40cQ8VHQ4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.05■□□□□ 0
Rab40cQ8VHQ4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.05■□□□□ -0
Rab40cQ8VHQ4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rab40cQ8VHQ4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab40cQ8VHQ4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rab40cQ8VHQ4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab40cQ8VHQ4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab40cQ8VHQ4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab40cQ8VHQ4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rab40cQ8VHQ4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab40cQ8VHQ4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms