Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Gm17971-201ENSMUST00000190239 806 ntBASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Lmcd1Q8VEE1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lmcd1Q8VEE1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.7■□□□□ 0.74
Lmcd1Q8VEE1 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.7■□□□□ 0.74
Lmcd1Q8VEE1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.7■□□□□ 0.74
Lmcd1Q8VEE1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Lmcd1Q8VEE1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Lmcd1Q8VEE1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lmcd1Q8VEE1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lmcd1Q8VEE1 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.7■□□□□ 0.74
Lmcd1Q8VEE1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lmcd1Q8VEE1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lmcd1Q8VEE1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lmcd1Q8VEE1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lmcd1Q8VEE1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lmcd1Q8VEE1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lmcd1Q8VEE1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lmcd1Q8VEE1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lmcd1Q8VEE1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lmcd1Q8VEE1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lmcd1Q8VEE1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lmcd1Q8VEE1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lmcd1Q8VEE1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lmcd1Q8VEE1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lmcd1Q8VEE1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lmcd1Q8VEE1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.68■□□□□ 0.74
Lmcd1Q8VEE1 Gm25016-201ENSMUST00000158399 131 ntBASIC19.68■□□□□ 0.74
Lmcd1Q8VEE1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.68■□□□□ 0.74
Lmcd1Q8VEE1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lmcd1Q8VEE1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lmcd1Q8VEE1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lmcd1Q8VEE1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lmcd1Q8VEE1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lmcd1Q8VEE1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Gm27463-201ENSMUST00000183569 57 ntBASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lmcd1Q8VEE1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lmcd1Q8VEE1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lmcd1Q8VEE1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Lmcd1Q8VEE1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lmcd1Q8VEE1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lmcd1Q8VEE1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lmcd1Q8VEE1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lmcd1Q8VEE1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lmcd1Q8VEE1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lmcd1Q8VEE1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Lmcd1Q8VEE1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lmcd1Q8VEE1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Lmcd1Q8VEE1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lmcd1Q8VEE1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Lmcd1Q8VEE1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Lmcd1Q8VEE1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lmcd1Q8VEE1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lmcd1Q8VEE1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lmcd1Q8VEE1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lmcd1Q8VEE1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Lmcd1Q8VEE1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lmcd1Q8VEE1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lmcd1Q8VEE1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms