Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.51■□□□□ 0.87
Ddx39aQ8VDW0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ddx39aQ8VDW0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx39aQ8VDW0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx39aQ8VDW0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx39aQ8VDW0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx39aQ8VDW0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.51■□□□□ 0.87
Ddx39aQ8VDW0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx39aQ8VDW0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx39aQ8VDW0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx39aQ8VDW0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx39aQ8VDW0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx39aQ8VDW0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx39aQ8VDW0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx39aQ8VDW0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx39aQ8VDW0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx39aQ8VDW0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx39aQ8VDW0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx39aQ8VDW0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Ddx39aQ8VDW0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx39aQ8VDW0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx39aQ8VDW0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx39aQ8VDW0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ddx39aQ8VDW0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.47■□□□□ 0.87
Ddx39aQ8VDW0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx39aQ8VDW0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ddx39aQ8VDW0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ddx39aQ8VDW0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx39aQ8VDW0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx39aQ8VDW0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx39aQ8VDW0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx39aQ8VDW0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx39aQ8VDW0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx39aQ8VDW0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx39aQ8VDW0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx39aQ8VDW0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx39aQ8VDW0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx39aQ8VDW0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx39aQ8VDW0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx39aQ8VDW0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx39aQ8VDW0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx39aQ8VDW0 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Gm18666-201ENSMUST00000190039 958 ntBASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx39aQ8VDW0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx39aQ8VDW0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx39aQ8VDW0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx39aQ8VDW0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx39aQ8VDW0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx39aQ8VDW0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx39aQ8VDW0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx39aQ8VDW0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx39aQ8VDW0 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.44■□□□□ 0.86
Ddx39aQ8VDW0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Ddx39aQ8VDW0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx39aQ8VDW0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx39aQ8VDW0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx39aQ8VDW0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx39aQ8VDW0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx39aQ8VDW0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms